Phd Research Proposal - Summer 2007

Ph.D. Comprehensive Qualifying Exam - Passed August 9 2007

Final Release to Committee July 31, 2007

Current

Archive

ToDO

To think About:

  • Fix "This …" ambiguous this.
  • Pleiades (Validation?)
  • Add Numbers (# of Disease articles in PubMed)
  • Machine Learning alternative scoring weight mechanism
  • Improve Figures
  • Coordinate terminology (relationship/association/link)

Other Evidence sources

  • Gene -> PubMed Articles -> Disease
  • Gene -> Orthologous Gene -> PubMed Articles -> Disease
  • Gene -> Interacting/Regulated Gene -> PubMed Articles -> Disease
  • Gene -> Structural Element -> PubMed Articles
  • Gene -> Function -> Related Genes -> PubMed Articles -> Disease

Better word choice?

  • Redefine Evidence as Property? Entity == ?
  • Linkage/Association/Relationship/…
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